Christensen, Geoff A Moon, JiWon Veach, Allison M Mosher, Jennifer J Wymore, Ann M van Nostrand, Joy D Zhou, Jizhong Hazen, Terry C Arkin, Adam P Elias, Dwayne A
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Using in-field bioreactors, we investigated the influence of exogenous microorganisms in groundwater planktonic and biofilm microbial communities as part of the Integrated Field Research Challenge (IFRC). After an acclimation period with source groundwater, bioreactors received either filtered (0.22 μM filter) or unfiltered well groundwater in trip...
Islam, Mahfuza Ercumen, Ayse Naser, Abu Mohd Unicomb, Leanne Rahman, Mahbubur Arnold, Benjamin F Colford, John M Luby, Stephen P
Microbiological water quality is usually assessed by the identification of Escherichia coli (E. coli), a fecal indicator. The hydrogen sulfide (H2S) test is an inexpensive, easy-to-use, and portable alternative field-based water quality test. Our study evaluated the H2S test's effectiveness as a water quality indicator for diarrhea risk. Field work...
Trevathan-Tackett, SM Thomson, ACG Ralph, PJ Macreadie, PI
© 2017 Elsevier B.V. Microbes are the ‘gatekeepers’ of the marine carbon cycle, yet the mechanisms for how microbial metabolism drives carbon sequestration in coastal ecosystems are still being defined. The proximity of coastal habitats to runoff and disturbance creates ideal conditions for microbial priming, i.e., the enhanced remineralisation of ...
Cohen, Alasdair Colford, John M
Globally, approximately 2 billion people lack microbiologically safe drinking water. Boiling is the most prevalent household water treatment method, yet evidence of its health impact is limited. To conduct this systematic review, we searched four online databases with no limitations on language or publication date. Studies were eligible if health o...
Techtman, Stephen M Mahmoudi, Nagissa Whitt, Kendall T Campa, Maria Fernanda Fortney, Julian L Joyner, Dominique C Hazen, Terry C
The nitrogen cycle in the marine environment is strongly affected by ammonia-oxidizing Thaumarchaeota. In some marine settings, Thaumarchaeotes can comprise a large percentage of the prokaryotic population. To better understand the biogeographic patterns of Thaumarchaeotes, we sought to investigate differences in their abundance and phylogenetic di...
Zhou, Zhen-Chao Zheng, Ji Wei, Yuan-Yuan Chen, Tao Dahlgren, Randy A Shang, Xu Chen, Hong
Antibiotic resistance genes (ARGs) in urban rivers are a serious public health concern in regions with poorly planned, rapid development. To gain insights into the predominant factors affecting the fate of ARGs in a highly polluted urban river in eastern China, a total of 285 ARGs, microbial communities, and 20 physicochemical parameters were analy...
Letzel, Anne-Catrin Li, Jing Amos, Gregory CA Millán-Aguiñaga, Natalie Ginigini, Joape Abdelmohsen, Usama R Gaudêncio, Susana P Ziemert, Nadine Moore, Bradley S Jensen, Paul R
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Comparative genomics is providing new opportunities to address the diversity and distributions of genes encoding the biosynthesis of specialized metabolites. An analysis of 119 genome sequences representing three closely related species of the marine actinomycete genus Salinispora reveals extraordinary biosynthetic diversity in the form of 176 dist...
Benjamin-Chung, Jade Arnold, Benjamin F Wade, Timothy J Schiff, Kenneth Griffith, John F Dufour, Alfred P Weisberg, Stephen B Colford, John M
Coliphages have been proposed as indicators of fecal contamination in recreational waters because they better mimic the persistence of pathogenic viruses in the environment and wastewater treatment than fecal indicator bacteria. We estimated the association between coliphages and gastrointestinal illness and compared it with the association with cu...
Martínez-Santos, P Martín-Loeches, M García-Castro, N Solera, D Díaz-Alcaide, S Montero, E García-Rincón, J
© 2017 Elsevier GmbH On-site sanitation is generally advocated as a means to eradicate the health hazards associated with open defecation. While this has provided a welcome upgrade to the livelihoods of millions of people in low-income countries, improved sanitation facilities are increasingly becoming a threat to domestic groundwater-based supplie...
Zehr, Jonathan P Weitz, Joshua S Joint, Ian