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Evaluation of the RDP Classifier Accuracy Using 16S rRNA Gene Variable Regions

Claudia Vilo Qunfeng Dong

The RDP Classifier is a widely used bioinfor-matic program that performs taxonomic classification of 16S rRNA gene sequences. However, the accuracy of the program is not clear when it is applied to common PCR products of the 16S rRNA variable regions, which are heavily used in microbiome projects. In this study, full-length 16S rRNA gene alignments...

The gut-joint axis in spondyloarthritis: immunological, microbial, and clinical insights.

Qaiyum, Zoya Lim, Melissa Inman, Robert D

Published in Seminars in immunopathology

The strong genetic and clinical overlaps between spondyloarthritis (SpA) and inflammatory bowel disease (IBD) have placed much needed focus on the gut-joint axis of inflammation in SpA, leading to three key hypotheses that attempt to unravel this complex relationship. The arthritogenic peptide hypothesis and the aberrant cellular trafficking hypoth...

Publication search with Microbiome; as keyword

Evaluation of the RDP Classifier Accuracy Using 16S rRNA Gene Variable Regions

The gut-joint axis in spondyloarthritis: immunological, microbial, and clinical insights.

Publication search
with Microbiome; as keyword