Accessible and easy-to-use standardized bioinformatics workflows are necessary to advance microbiome research from observational studies to large-scale, data-driven approaches. Standardized multi-omics data enables comparative studies, data reuse, and applications of machine learning to model biological processes. To advance broad accessibility of ...
The fields of Metagenomics and Metatranscriptomics involve the examination of complete nucleotide sequences, gene identification, and analysis of potential biological functions within diverse organisms or environmental samples. Despite the vast opportunities for discovery in metagenomics, the sheer volume and complexity of sequence data often prese...
Almost a decade ago, Ken Hinckley stressed the importance for HCI program committees and reviewers to champion submitted work that has merit. Rarely, however, are we encouraged to champion published work. In this essay I list five CHI PLAY papers that I like and explain what I like about them. I recommend you do the same.
The aim of this SHREC 2024 track is to compare different algorithms for retrieving non-rigid complementary shape pairs, applied in the context of 3D objects being more complex (e.g. with many folds and roughness) such as proteins. The dataset used for this benchmark is based on 52 selected protein-protein complexes for which an experimental structu...
Isthmic spondylolysis is characterized by a stress injury to the pars interarticularis bones of the lumbar spines and is often missed by conventional magnetic resonance imaging (MRI), necessitating a computed tomography (CT) for accurate diagnosis. We compare MRI techniques suitable for producing CT-like images. Lumbar spines of asymptomatic and lo...
IntroductionCoronary artery calcium (CAC) scans contain useful information beyond the Agatston CAC score that is not currently reported. We recently reported that artificial intelligence (AI)-enabled cardiac chambers volumetry in CAC scans (AI-CAC™) predicted incident atrial fibrillation in the Multi-Ethnic Study of Atherosclerosis (MESA). In this ...
Large-scale multiphysics simulations are computationally challenging due to the coupling of multiple processes with widely disparate time scales. The advent of exascale computing systems exacerbates these challenges since these systems enable ever-increasing size and complexity. In recent years, there has been renewed interest in developing multira...
Visually oriented designers often struggle to create effective generative AI (GenAI) prompts. A preliminary study identified specific issues in composing and fine-tuning prompts, as well as needs in accurately translating intentions into rich input. We developed DesignPrompt, a moodboard tool that lets designers combine multiple modalities — images...
3D point clouds stand as one of the prevalent representations for 3D data, offering the advantage of closely aligning with sensing technologies and providing an unbiased representation of a measured physical scene. Progressive compression is required for real-world applications operating on networked infrastructures with restricted or variable band...
Various metrics and interventions have been developed to identify and mitigate unfair outputs of machine learning systems. While individuals and organizations have an obligation to avoid discrimination, the use of fairness-aware machine learning interventions has also been described as amounting to 'algorithmic positive action' under European Union...
