Papadopoulou, Areti Harding, Daniel Slabaugh, Greg Marouli, Eirini Deloukas, Panos
OBJECTIVE: Atrial fibrillation (AF) is the most common cardiac arrythmia, and it is associated with increased risk for ischemic stroke, which is underestimated, as AF can be asymptomatic. The aim of this study was to develop optimal ML models for prediction of AF in the population, and secondly for ischemic stroke in AF patients. METHODS: To develo...
Liang, Christopher Paclibar, Cayz G Gonzaga, Noresa L Sison, Stephanie A Bath, Harman S Biju, Agnes P Mukherjee, Jogeshwar
Therapeutic antibodies for reducing Aβ plaque load in Alzheimer’s disease (AD) is currently making rapid progress. The diagnostic imaging of Aβ plaque load in AD has been underway and is now used in clinical studies. Here, we report our preliminary findings on imaging a therapeutic antibody, Lecanemab, in a postmortem AD brain anterior cingulate. [...
Wang, Sarah S Hall, Madison L Lee, EunJung Kim, Soon-Chan Ramesh, Neha Lee, Sang Hyub Jang, Jin-Young Bold, Richard J Ku, Ja-Lok Hwang, Chang-Il
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In pancreatic ductal adenocarcinoma (PDAC), no recurrent metastasis-specific mutation has been found, suggesting that epigenetic mechanisms, such as DNA methylation, are the major contributors of late-stage disease progression. Here, we performed the first whole-genome bisulfite sequencing (WGBS) on mouse and human PDAC organoid models to identify ...
Oka, Takaki Matsuzawa, Yuki Tsuneyoshi, Momoka Nakamura, Yoshitaka Aoshima, Ken Tsugawa, Hiroshi
Alzheimer's disease (AD) is a neurodegenerative disease that commonly causes dementia. Identifying biomarkers for the early detection of AD is an emerging need, as brain dysfunction begins two decades before the onset of clinical symptoms. To this end, we reanalyzed untargeted metabolomic mass spectrometry data from 905 patients enrolled in the AD ...
Chaumeil, Myriam M Bankson, James A Brindle, Kevin M Epstein, Shdema Gallagher, Ferdia A Grashei, Martin Guglielmetti, Caroline Kaggie, Joshua D Keshari, Kayvan R Knecht, Stephan
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Hyperpolarization techniques significantly enhance the sensitivity of magnetic resonance (MR) and thus present fascinating new directions for research and applications with in vivo MR imaging and spectroscopy (MRI/S). Hyperpolarized 13C MRI/S, in particular, enables real-time non-invasive assessment of metabolic processes and holds great promise fo...
Schworer, Emily K Handen, Benjamin L Petersen, Melissa O'Bryant, Sid Peven, Jamie C Tudorascu, Dana L Lee, Laisze Krinsky‐McHale, Sharon J Hom, Christy L Clare, Isabel CH
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IntroductionPeople with Down syndrome (DS) have a 75% to 90% lifetime risk of Alzheimer's disease (AD). AD pathology begins a decade or more prior to onset of clinical AD dementia in people with DS. It is not clear if plasma biomarkers of AD pathology are correlated with early cognitive and functional impairments in DS, and if these biomarkers coul...
Frankhouser, David E Rockne, Russell C Uechi, Lisa Zhao, Dandan Branciamore, Sergio O’Meally, Denis Irizarry, Jihyun Ghoda, Lucy Ali, Haris Trent, Jeffery M
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Chronic myeloid leukemia (CML) is initiated and maintained by BCR::ABL which is clinically targeted using tyrosine kinase inhibitors (TKIs). TKIs can induce long-term remission but are also not curative. Thus, CML is an ideal system to test our hypothesis that transcriptome-based state-transition models accurately predict cancer evolution and treat...
Barthélemy, Nicolas R Salvadó, Gemma Schindler, Suzanne E He, Yingxin Janelidze, Shorena Collij, Lyduine E Saef, Benjamin Henson, Rachel L Chen, Charles D Gordon, Brian A
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With the emergence of Alzheimer's disease (AD) disease-modifying therapies, identifying patients who could benefit from these treatments becomes critical. In this study, we evaluated whether a precise blood test could perform as well as established cerebrospinal fluid (CSF) tests in detecting amyloid-β (Aβ) plaques and tau tangles. Plasma %p-tau217...
Böken, Dorothea Cox, Dezerae Burke, Melanie Lam, Jeff YL Katsinelos, Taxiarchis Danial, John S Fertan, Emre McEwan, William A Rowe, James B Klenerman, David
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Hyperphosphorylation and aggregation of the protein tau play key roles in the development of Alzheimer’s disease (AD). While the molecular structure of the filamentous tau aggregates has been determined to atomic resolution, there is far less information available about the smaller, soluble aggregates, which are believed to be more toxic. Tradition...
Khor, WeeLiam Chen, Yichen Kelly Roberts, Michael Ciampa, Francesco
This paper presents a study on the effectiveness of a convolutional neural network (CNN) in classifying infrared images for security scanning. Infrared thermography was explored as a non-invasive security scanner for stand-off and walk-through concealed object detection. Heat generated by human subjects radiates off the clothing surface, allowing d...