Vlachakis, Dimitrios Fakourelis, Paraskevas Megalooikonomou, Vasileios Makris, Christos Kossida, Sophia
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PeerJ
During the past few years, pharmacophore modeling has become one of the key components in computer-aided drug design and in modern drug discovery. DrugOn is a fully interactive pipeline designed to exploit the advantages of modern programming and overcome the command line barrier with two friendly environments for the user (either novice or experie...
Norscia, Ivan Palagi, Elisabetta
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PeerJ
Dominance hierarchy influences the life quality of social animals, and its definition should in principle be based on the outcome of agonistic interactions. However, defining and comparing the dominance profile of social groups is difficult due to the different dominance measures used and because no one measure explains it all. We applied different...
Jernigan, Kristin K Bordenstein, Seth R
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PeerJ
Tandem-repeat protein domains, composed of repeated units of conserved stretches of 20-40 amino acids, are required for a wide array of biological functions. Despite their diverse and fundamental functions, there has been no comprehensive assessment of their taxonomic distribution, incidence, and associations with organismal lifestyle and phylogeny...
Sevier, Thomas L Stegink-Jansen, Caroline W
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PeerJ
Introduction. Patients with chronic lateral elbow (LE) tendinopathy, commonly known as tennis elbow, often experience prolonged symptoms and frequent relapses. Astym treatment, evidenced in animal studies to promote the healing and regeneration of soft tissues, is hypothesized to improve outcomes in LE tendinopathy patients. This study had two obje...
O'Connor, Kelly M Rittenhouse, Chadwick D Millspaugh, Joshua J Rittenhouse, Tracy A G
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PeerJ
Box turtles (Terrapene carolina) are widely distributed but vulnerable to population decline across their range. Using distance sampling, morphometric data, and an index of carapace damage, we surveyed three-toed box turtles (Terrapene carolina triunguis) at 2 sites in central Missouri, and compared differences in detection probabilities when trans...
Wangkumhang, Pongsakorn Wilantho, Alisa Shaw, Philip J Flori, Laurence Moazami-Goudarzi, Katayoun Gautier, Mathieu Duangjinda, Monchai Assawamakin, Anunchai Tongsima, Sissades
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PeerJ
Cattle commonly raised in Thailand have characteristics of Bos indicus (zebu). We do not know when or how cattle domestication in Thailand occurred, and so questions remain regarding their origins and relationships to other breeds. We obtained genome-wide SNP genotypic data of 28 bovine individuals sampled from four regions: North (Kho-Khaolampoon)...
Carrillo-Larco, Rodrigo M Miranda, J Jaime Bernabé-Ortiz, Antonio
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PeerJ
Objectives. We aimed to assess if Caesarean section is a risk factor for overnutrition in early- and late-childhood, and to assess the magnitude of the effect of child- versus family-related variables in these risk estimates. Methods. Longitudinal data from Peruvian children from the Young Lives Study was used. Outcomes assessed were overweight, ob...
Crouch, Pierre-Cédric B Rose, Carol Dawson Johnson, Mallory Janson, Susan L
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PeerJ
The HITECH Act signed into law in 2009 requires hospitals to provide patients with electronic access to their health information through an electronic personal health record (ePHR) in order to receive Medicare/Medicaid incentive payments. Little is known about who uses these systems or the impact these systems will have on patient outcomes in HIV c...
Oliva, Laia Baron, Cristian Fernández-López, José-Antonio Remesar, Xavier Alemany, Marià
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PeerJ
Background and Objectives. Glucose, an aldose, spontaneously reacts with protein amino acids yielding glycosylated proteins. The compounds may reorganize to produce advanced glycosylation products, which regulatory importance is increasingly being recognized. Protein glycosylation is produced without the direct intervention of enzymes and results i...
Kang, Dongwan D Froula, Jeff Egan, Rob Wang, Zhong
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PeerJ
Grouping large genomic fragments assembled from shotgun metagenomic sequences to deconvolute complex microbial communities, or metagenome binning, enables the study of individual organisms and their interactions. Because of the complex nature of these communities, existing metagenome binning methods often miss a large number of microbial species. I...