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setsApp: Set operations for Cytoscape Nodes and Edges

  • Morris, JH
  • Wu, A
  • Doncheva, NT
  • Albrecht, M
  • Ferrin, TE
Publication Date
Jul 01, 2014
eScholarship - University of California
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© 2014 Morris JH et al. setsApp ( is a relatively simple Cytoscape 3 app for users to handle groups of nodes and/or edges. It supports several important biological workflows and enables various set operations. setsApp provides basic tools to create sets of nodes or edges, import or export sets, and perform standard set operations (union, difference, intersection) on those sets. The sets functionality is also exposed to users and app developers in the form of a set of commands that can be used for scripting purposes or integrated in other Cytoscape apps.

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