The presence of nonnative species in Lake Tahoe (CA/NV), USA has been an ongoing concern for many decades, and the management of these species calls for an understanding of their ability to cope with the Lake's stressors and for an understanding of their potential to out-compete and reduce the populations of native species. Decreasing levels of ultraviolet radiation (UVR) due to eutrophication and increasing levels of phototoxic polycyclic aromatic hydrocarbons (PAHs) due to recreational activities may combine to affect the relative ability of native versus nonnative ﬁsh species to survive in the lake. Following a series of toxicity tests which exposed larvae of the native Lahontan redside minnow (Richardsonius egregius) and the nonnative warm-water bluegill sunﬁsh (Lepomis macrochirus) to UVR and FLU, the occurrence of skin damage and/or physiologic defense mechanisms were studied using multiple microscopic techniques. The native minnow appeared to exhibit fewer instances of skin damage and increased instances of cellular coping mechanisms. This study supports the results of previous work conducted by the authors, who determined that the native redside minnow is the more tolerant of the two species, and that setting and adhering to a water quality standard for UVR transparency may aid in preventing the spread of the less tolerant nonnative bluegill and similar warm-water species.