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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.

Authors
  • Bradnam, Keith R
  • Fass, Joseph N
  • Alexandrov, Anton
  • Baranay, Paul
  • Bechner, Michael
  • Birol, Inanç
  • Boisvert, Sébastien
  • Chapman, Jarrod A
  • Chapuis, Guillaume
  • Chikhi, Rayan
  • Chitsaz, Hamidreza
  • Chou, Wen-Chi
  • Corbeil, Jacques
  • Del Fabbro, Cristian
  • Docking, T Roderick
  • Durbin, Richard
  • Earl, Dent
  • Emrich, Scott
  • Fedotov, Pavel
  • Fonseca, Nuno A
  • And 71 more
Type
Published Article
Journal
GigaScience
Publisher
Oxford University Press
Publication Date
Jan 01, 2013
Volume
2
Issue
1
Pages
10–10
Identifiers
DOI: 10.1186/2047-217X-2-10
PMID: 23870653
Source
Medline
License
Unknown

Abstract

Many current genome assemblers produced useful assemblies, containing a significant representation of their genes and overall genome structure. However, the high degree of variability between the entries suggests that there is still much room for improvement in the field of genome assembly and that approaches which work well in assembling the genome of one species may not necessarily work well for another.

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