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ASAP: analysis of peptide composition.

Authors
  • Serra-Hartmann, X
  • Rebordosa, X
  • Piñol, J
  • Querol, E
  • Martí-Renom, M A
Type
Published Article
Journal
Bioinformatics (Oxford, England)
Publication Date
Dec 01, 2000
Volume
16
Issue
12
Pages
1153–1154
Identifiers
PMID: 11159335
Source
Medline
License
Unknown

Abstract

ASAP is a web tool designed to search for specific dipeptides, tripeptides and tetrapeptides in a protein sequence database. The server allows for: (a) identification of frequent and infrequent peptides and the creation of peptide probability tables for a given database of sequences (GenerNet program), (b) determination of the compatibility of an amino-acid sequence to the given peptide probability tables (ClonErrNet program); and (c) comparison of different protein databases based on peptide composition (CompNet program). ASAP server can be useful in protein engineering and/or protein classification studies.

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