Amphioxus functional genomics and the origins of vertebrate gene regulation

Authors

• Marlétaz, Ferdinand^{1, 2}
• Firbas, Panos N.³
• Maeso, Ignacio³
• Tena, Juan J.³
• Bogdanovic, Ozren^{4, 5, 6}
• Perry, Malcolm^{7, 8}
• Wyatt, Christopher D. R.^{9, 10}
• de la Calle-Mustienes, Elisa³
• Bertrand, Stephanie¹¹
• Burguera, Demian^{9, 12}
• Acemel, Rafael D.³
• van Heeringen, Simon J.¹³
• Naranjo, Silvia³
• Herrera-Ubeda, Carlos¹²
• Skvortsova, Ksenia⁴
• Jimenez-Gancedo, Sandra³
• Aldea, Daniel¹¹
• Marquez, Yamile⁹
• Buono, Lorena³
• Kozmikova, Iryna¹⁴
• Permanyer, Jon⁹
• Louis, Alexandra^{15, 16, 17}
• Albuixech-Crespo, Beatriz¹²
• Le Petillon, Yann¹¹
• Leon, Anthony¹¹
• Subirana, Lucie¹¹
• Balwierz, Piotr J.^{7, 8}
• Duckett, Paul Edward⁴
• Farahani, Ensieh³
• Aury, Jean-Marc¹⁸
• Mangenot, Sophie¹⁸
• Wincker, Patrick¹⁹
• Albalat, Ricard²⁰
• Benito-Gutiérrez, Èlia²¹
• Cañestro, Cristian²⁰
• Castro, Filipe²²
• D’Aniello, Salvatore²³
• Ferrier, David E. K.²⁴
• Huang, Shengfeng²⁵
• Laudet, Vincent¹¹
• Marais, Gabriel A. B.²⁶
• Pontarotti, Pierre²⁷
• Schubert, Michael²⁸
• Seitz, Hervé²⁹
• Somorjai, Ildiko³⁰
• Takahashi, Tokiharu³¹
• Mirabeau, Olivier³²
• Xu, Anlong^{25, 33}
• Yu, Jr-Kai³⁴
• Carninci, Piero^{35, 36}
• Martinez-Morales, Juan Ramon³
• Crollius, Hugues Roest^{15, 16, 17}
• Kozmik, Zbynek¹⁴
• Weirauch, Matthew T.^{37, 38}
• Garcia-Fernàndez, Jordi¹²
• Lister, Ryan^{6, 39}
• Lenhard, Boris^{7, 8, 40}
• Holland, Peter W. H.¹
• Escriva, Hector¹¹
• Gómez-Skarmeta, Jose Luis³
• Irimia, Manuel^{9, 10}
And 41 more

• ¹ University of Oxford, Department of Zoology, Oxford, UK , Oxford (United Kingdom)
• ² Okinawa Institute of Science and Technology Graduate University, Molecular Genetics Unit, Onna-son, Japan , Onna-son (Japan)
• ³ Centro Andaluz de Biología del Desarrollo (CABD), CSIC-Universidad Pablo de Olavide-Junta de Andalucía, Seville, Spain , Seville (Spain)
• ⁴ Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, New South Wales, Australia , Sydney (Australia)
• ⁵ University of New South Wales, St Vincent’s Clinical School, Faculty of Medicine, Sydney, New South Wales, Australia , Sydney (Australia)
• ⁶ The University of Western Australia, Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, Crawley, Western Australia, Australia , Crawley (Australia)
• ⁷ Imperial College London, Institute of Clinical Sciences, Faculty of Medicine, London, UK , London (United Kingdom)
• ⁸ MRC London Institute of Medical Sciences, Computational Regulatory Genomics, London, UK , London (United Kingdom)
• ⁹ Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain , Barcelona (Spain)
• ¹⁰ Universitat Pompeu Fabra (UPF), Barcelona, Spain , Barcelona (Spain)
• ¹¹ Biologie Intégrative des Organismes Marins, BIOM, Observatoire Océanologique, CNRS and Sorbonne Université, Banyuls sur Mer, France , Banyuls sur Mer (France)
• ¹² University of Barcelona, Department of Genetics, Microbiology and Statistics, Faculty of Biology, and Institut de Biomedicina (IBUB), Barcelona, Spain , Barcelona (Spain)
• ¹³ Radboud University, Department of Molecular Developmental Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Nijmegen, The Netherlands , Nijmegen (Netherlands)
• ¹⁴ Institute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic , Prague (Czechia)
• ¹⁵ Institut de Biologie de l’ENS, IBENS, Ecole Normale Supérieure, Paris, France , Paris (France)
• ¹⁶ Inserm, U1024, Paris, France , Paris (France)
• ¹⁷ CNRS, UMR 8197, Paris, France , Paris (France)
• ¹⁸ Genoscope, Institut de biologie François-Jacob, Commissariat à l’Energie Atomique (CEA), Université Paris-Saclay, Evry, France , Evry (France)
• ¹⁹ Génomique Métabolique, Genoscope, Institut de biologie François Jacob, Commissariat à l’Energie Atomique (CEA), CNRS, Université Evry, Université Paris-Saclay, Evry, France , Evry (France)
• ²⁰ University of Barcelona, Department of Genetics, Microbiology and Statistics, Faculty of Biology and Institut de Recerca de la Biodiversitat (IRBio), Barcelona, Spain , Barcelona (Spain)
• ²¹ University of Cambridge, Department of Zoology, Cambridge, UK , Cambridge (United Kingdom)
• ²² University of Porto, Interdisciplinary Centre of Marine and Environmental Research (CIIMAR/CIMAR) and Faculty of Sciences (FCUP), Department of Biology, Porto, Portugal , Porto (Portugal)
• ²³ Stazione Zoologica Anton Dohrn Napoli, Biology and Evolution of Marine Organisms, Naples, Italy , Naples (Italy)
• ²⁴ University of St Andrews, The Scottish Oceans Institute, Gatty Marine Laboratory, St Andrews, UK , St Andrews (United Kingdom)
• ²⁵ Sun Yat-sen University, State Key Laboratory of Biocontrol, School of Life Sciences, Guangzhou, China , Guangzhou (China)
• ²⁶ Laboratoire de Biométrie et Biologie Evolutive (UMR 5558), CNRS and Université Lyon 1, Villeurbanne, France , Villeurbanne (France)
• ²⁷ IRD, APHM, Microbe, Evolution, PHylogénie, Infection, IHU Méditerranée Infection and CNRS, Aix Marseille University, Marseille, France , Marseille (France)
• ²⁸ Institut de la Mer de Villefranche-sur-Mer, Sorbonne Université, CNRS, Laboratoire de Biologie du Développement de Villefranche-sur-Mer, Villefranche-sur-Mer, France , Villefranche-sur-Mer (France)
• ²⁹ UMR 9002 CNRS, Institut de Génétique Humaine, Université de Montpellier, Montpellier, France , Montpellier (France)
• ³⁰ University of St Andrews, Biomedical Sciences Research Complex, School of Biology, St Andrews, UK , St Andrews (United Kingdom)
• ³¹ University of Manchester, School of Medical Sciences, Faculty of Biology, Medicine and Health, Manchester, UK , Manchester (United Kingdom)
• ³² INSERM U830, Équipe Labellisée LNCC, SIREDO Oncology Centre, Institut Curie, PSL Research University, Paris, France , Paris (France)
• ³³ Beijing University of Chinese Medicine, School of Life Sciences, Beijing, China , Beijing (China)
• ³⁴ Academia Sinica, Institute of Cellular and Organismic Biology, Taipei, Taiwan , Taipei (Taiwan)
• ³⁵ RIKEN Center for Life Science Technologies (Division of Genomic Technologies) (CLST DGT), Yokohama, Japan , Yokohama (Japan)
• ³⁶ RIKEN Center for Integrative Medical Sciences, Laboratory for Transcriptome Technology, Yokohama, Japan , Yokohama (Japan)
• ³⁷ Cincinnati Children’s Hospital Medical Center, Center for Autoimmune Genomics and Etiology, Divisions of Biomedical Informatics and Developmental Biology, Cincinnati, OH, USA , Cincinnati (United States)
• ³⁸ University of Cincinnati College of Medicine, Department of Pediatrics, Cincinnati, OH, USA , Cincinnati (United States)
• ³⁹ Harry Perkins Institute of Medical Research, Nedlands, Western Australia, Australia , Nedlands (Australia)
• ⁴⁰ University of Bergen, Sars International Centre for Marine Molecular Biology, Bergen, Norway , Bergen (Norway)

Type

Published Article

Journal

Nature

Publisher

Springer Nature

Publication Date

Nov 21, 2018

Volume

564

Issue

7734

Pages

64–70

Identifiers

DOI: 10.1038/s41586-018-0734-6

Source

Springer Nature

License

Green