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Optofluidic microscopy and wavefront microscopy: innovations in biological imaging

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  • Biology
  • Medicine
  • Physics


This thesis presents two new microscopic imaging techniques: the optofluidic microscopy (OFM) and the wavefront microscopy (WM). By integrating optical functionalities onto a single semiconductor chip, these inventions could reduce the cost and improve the efficiency and quality of microscopic imaging in biological research and clinical diagnostics. First, OFM utilizes a microfluidic flow to deliver cellular samples across array(s) of micron-sized apertures defined on a metal-coated CMOS image sensor to acquire direct projection images of the samples. Although the OFM prototype is as small as a dime, it can render high resolution images (~1 µm) with comparable quality to those of a bulky standard optical microscope. OFM has great potential in revolutionizing the way we use microscopes. For example, the availability of tens or even hundreds of microscopes on a single chip will allow massively paralleled imaging of large populations of cells or microorganisms; the compactness and low cost of the OFM can enable portable and even disposable biomedical diagnostic tools for future telemedicine and personalized health care. Second, we present a new microscopy concept - WM. Wavefront image sensor (WIS) is the enabling component of WM. By monitoring the tightly confined transmitted light spots through a 2D aperture grid (spacing = 11 µm, diameter = 6 µm) fabricated on a CMOS image sensor in a high Fresnel number regime, we can accurately measure both intensity and phase front variations (a measured normalized phase gradient sensitivity of 0.1 mrad under the typical working condition - 1.0 second total signal accumulation time and 9.2 µW/cm^2 light intensity on the sensor) of a wavefront separately and quantitatively. Therefore, researchers and clinicians can incorporate pure phase imaging into their current microscope systems by simply adding the WIS in place of the conventional camera. When combined with adaptive optics strategies, this technology will facilitate deep tissue imaging using multiphoton microscopy.

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