Deng, Lisi Guo, Xiaozhen Chen, Jiehua Li, Baoyi Liu, Na Xia, Jinyu Ou, Mengdang Hong, Zhongsi
Published in
Frontiers in Microbiology
Background Research on the effects of intestinal microbiota transplantation (IMT) on chronic HBV infection (CHB) progression associated liver disease (HBV-CLD) and alterations in the microbiota post-IMT are quite limited for the moment. Methods By integrating microbiome with metabolome analyses, we aimed to the function of IMT and the alterations o...
Routaboul, Jean‐marc Bellenot, Caroline Olympio, Aurore Clément, Gilles Citerne, Sylvie Remblière, Céline Charvin, Magali Franke, Lars Chiarenza, Serge Vasselon, Damien
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SUMMARY Hydathodes are small organs found on the leaf margins of vascular plants which release excess xylem sap through a process called guttation. While previous studies have hinted at additional functions of hydathode in metabolite transport or auxin metabolism, experimental support is limited. We conducted comprehensive transcriptomic, metabolom...
Sun, Shijun Yang, Yan Hao, Shuiyuan Liu, Ye Zhang, Xin Yang, Pudi Zhang, Xudong Luo, Yusong
Published in
Frontiers in Plant Science
Introduction Low ground temperature is a major factor limiting overwintering in cucumber cultivation facilities in northern alpine regions. Lower temperatures in the root zone directly affect the physiological function of the root system, which in turn affects the normal physiological activity of plants. However, the importance of the ground temper...
Shang, Huiying Lu, Yuan Xun, Lulu Wang, Kun Li, Bin Liu, Yuxuan Ma, Tao
Published in
Frontiers in Plant Science
Introduction Stephania longa, a medicinal plant renowned for producing cepharanthine, has gained significance due to the compound's notable antiviral properties against SARS-CoV-2. However, a comprehensive genetic understanding of S. longa has been lacking. This study aimed to develop a high-quality, chromosome-level genome assembly to uncover the ...
Zhou, Hang Meng, Fengyan Jiang, Wenxin Lu, Xutong Zhang, Rui Huang, Anqi Wu, Kunlun Deng, Peng Wang, Yaxin Zhao, Huimin
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Published in
Frontiers in Plant Science
Soil salinity pollution is increasing worldwide, seriously affecting plant growth and crop production. Existing reports on how potassium indole-3-butyric acid (IBAK) regulates rice salt stress adaptation by affecting rice carbon metabolism, transcription factor (TF) genes expression, and biosynthesis of secondary metabolites still have limitations....
Yang, Hong Dai, Longjun Liu, Mingyang Fan, Xiaokang Lu, Liangruinan Guo, Bingbing Wang, Zhenhui Wang, Lifeng
Published in
Frontiers in Plant Science
Hevea brasiliensis is an important cash crop with the product named natural rubber (NR) for markets. Ethylene (ET) is the most effective yield stimulant in NR production but the molecular mechanism remains incomplete. Here, latex properties analysis, transcriptome analysis, and metabolic profiling were performed to investigate the mechanism of NR y...
Lu, Haoran Xie, Teng Wei, Shanshan Wang, Yanhua Li, Huibing Luo, Baochang Qin, Xiaohong Liu, Xizhi Zhao, Zilong Chen, Zhibiao
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Published in
Frontiers in Aging Neuroscience
Subarachnoid hemorrhage (SAH) is a severe subtype of hemorrhagic stroke. The molecular mechanisms of its secondary brain damage remain obscure. To investigate the alterations in gene and metabolite levels following SAH, we construct the transcriptome and metabolome profiles of the rat cerebral cortex post-SAH using whole transcriptome sequencing an...
Li, Yangjie Liu, Danping He, Yanglan Zhang, Zeming Zeng, Ajuan Fan, Chunlei Lyu, Lingna He, Zilong Ding, Huiguo
Published in
Frontiers in Microbiology
Background Numerous studies have confirmed that gut microbiota plays a crucial role in the progression of cirrhosis. However, the contribution of gut fungi in cirrhosis is often overlooked due to the relatively low abundance. Methods We employed 16S ribosomal RNA sequencing, internal transcribed spacer sequencing, and untargeted metabolomics techni...
Liao, Ting Li, Xiang-Ru Fan, Li Zhang, Bo Zheng, Wei-Ming Hua, Jia-Jia Li, Li Mahror, Norlia Cheng, Lai-Hoong
Published in
Frontiers in Microbiology
Kombucha, a fermented tea prepared with a symbiotic culture of bacteria and yeast (SCOBY), offers a unique and unpredictable home-brewed fermentation process. Therefore, the need for a controlled kombucha fermentation process has become evident, which requiring a thorough understanding of the microbial composition and its relationship with the meta...
Tang-Wing, Cassandra Mohanty, Ipsita Bryant, MacKenzie Makowski, Katherine Melendez, Daira Dorrestein, Pieter Knight, Rob Caraballo-Rodríguez, Andrés Allaband, Celeste Jenné, Keith
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UNLABELLED: Gastrointestinal diseases are the most frequently reported clinical problems in captive common marmosets (Callithrix jacchus), often affecting the health and welfare of the animal and ultimately their use as a research subject. The microbiome has been shown to be intimately connected to diet and gastrointestinal health. Here, we use sho...
