Ouali, Sonia Courbot, Jean-Baptiste Pierron, Romain Haeberlé, Olivier
Published in
Inverse Problems
In this paper, we place ourselves in the context of the Bayesian framework for image segmentation in the presence of varying blur. The proposed approach is based on Triplet Markov Random Fields (TMRF). This method takes into account, during segmentation, peculiarities of an image such as noise, blur, and texture. We present an unsupervised TMRF met...
Abdelrahman, Mona H. Shen, Jerry Fisher, Nicholas C. Losert, Wolfgang Fourkas, John T.
Published in
Frontiers in Bioengineering and Biotechnology
Introduction Photomodifiable azopolymer nanotopographies represent a powerful means of assessing how cells respond to rapid changes in the local microenvironment. However, previous studies have suggested that azopolymers are readily photomodified under typical fluorescence imaging conditions over much of the visible spectrum. Here we assess the sta...
Sidlipura, Sujith Ayadi, Abderrahmane Lagardère Deléglise, Mylène
This study evaluates multimodal imaging for characterizing microstructures in partially impregnated thermoplastic matrix composites made of woven glass fiber and polypropylene. The research quantifies the impregnation degree of fiber bundles within composite plates manufactured through a simplified compression resin transfer molding process. For co...
Thiyagarajan, Dhivya B. Stette, Marie H. S. Afzal, Bilal M. Ahluwalia, Balpreet S. Agarwal, Krishna Dalmo, Roy A. Wolfson, Deanna L.
Published in
Frontiers in Marine Science
The rising problem of plastic pollution is becoming one of the major environmental issues for the world. In the ocean, plastics undergo degradation into smaller microplastics (MPs) and nanoplastics (NPs). Wild fish and farmed salmon would likely be exposed to these NPs and MPs both through skin and through skin wounds. Keratocyte cells, located in ...
Yang, Yuqing Li, Bohan Li, Yulong
The ability to measure dynamic changes in neurochemicals with high spatiotemporal resolution is essential for understanding the diverse range of functions mediated by the brain. We review recent advances in genetically encoded sensors for detecting neurochemicals and discuss their in vivo applications. For example, notable progress has been made wi...
Frei, Michelle S. Mehta, Sohum Zhang, Jin
Genetically encoded fluorescent biosensors have revolutionized the study of cell signaling and metabolism, as they allow for live-cell measurements with high spatiotemporal resolution. This success has spurred the development of tailor-made biosensors that enable the study of dynamic phenomena on different timescales and length scales. In this revi...
Morisaki, Tatsuya Wiggan, O'Neil Stasevich, Timothy J.
The translation of messenger RNA (mRNA) into proteins represents the culmination of gene expression. Recent technological advances have revolutionized our ability to investigate this process with unprecedented precision, enabling the study of translation at the single-molecule level in real time within live cells. In this review, we provide an over...
Seidemann, Suse Salomon, Florian Hoffmann, Karl B. Kurth, Thomas Sbalzarini, Ivo F. Haase, Robert Ader, Marius
Published in
Frontiers in Molecular Neuroscience
The functionality of photoreceptors, rods, and cones is highly dependent on their outer segments (POS), a cellular compartment containing highly organized membranous structures that generate biochemical signals from incident light. While POS formation and degeneration are qualitatively assessed on microscopy images, reliable methodology for quantit...
Hüpfel, Manuel Nienhaus, Gerd Ulrich
Published in
Journal of Physics: Photonics
Thanks to its unique optical sectioning capability, light-sheet fluorescence microscopy has proven to be a powerful technique for volumetric imaging of entire model organisms with high spatial and temporal resolution. For light sheet generation with scanned laser beams, holographic beam shaping offers precise control over the optical fields excitin...
Kaňa, Radek Eichner, Meri Gall, Andrew Ilioaia, Cristian
Published in
Frontiers in Photobiology
Photosynthesis which harvests energy from the Sun, whether it occurs in prokaryotes or eukaryotes, is a key biological process that ultimately nourishes the biosphere. The molecular efficiencies of the photo-physical and physiological processes are intricately tied not only to the photo-physics/enzymatic kinetics of the proteins involved, but also ...