In Central America, coffee is mainly grown in agroforestry systems. This practice modifies the microclimate, which, in turn, influences coffee growth and development. However, modeling these microclimate modifications is a challenge when trying to predict the development of a disease in the understory crop, based on variables usually monitored in w...
Cover crops are crucial to diversify cropping systems into more agroecological systems by providing ecosystem services, such as reduction of nitrate leaching, provision of a green manure effect, and soil carbon storage. However, they can influence water drainage and nitrogen (N) or water availability for the succeeding crop, depending on their mana...
The sterile insect technique (SIT) is a technique to control some vectors of diseases by releasing sterile males. However, during these releases, sterilized females can be (accidentally) released and since only females are vectors of diseases, it is important to study their impact when arthropod viruses are circulating. To that aim, we develop and ...
After many years of decline, hunger in Africa is growing again. This represents a global societal issue that all disciplines concerned with data analysis are facing. The rapid and accurate identification of food insecurity situations is a complex challenge. Although a number of food security alert and monitoring systems exist in food insecure count...
The sterile insect technique (SIT) is a method of biological control of pests and disease vector insects. It includes mass-rearing and release of sterile males of the target species so that wild females mated with sterile males would not produce offspring. An innovative version of this technique, called boosted SIT, relies on the use of sterile mal...
This article presents an ontological and terminological resource guided process for targeted extraction of scientific experimental data. Our method relies on the scientific publication representation (SciPuRe) describing the extracted data through ontological, lexical and structural (using segments in the scientific documents) features. Relevance s...
Leptospirosis is a globally important zoonotic disease. The disease is particularly important in tropical and subtropical countries. Infections in humans can be caused by exposure to infected animals or contaminated soil or water, which are suitable for Leptospira. To explore the cluster area, the Global Moran's I index was calculated for incidence...
Published in Bioinformatics (Oxford, England)
The increasing interest of animal and plant research communities for biomedical 3D imaging devices results in the emergence of new topics. The anatomy, structure and function of tissues can be observed non-destructively in time-lapse multimodal imaging experiments by combining the outputs of imaging devices such as X-ray CT and MRI scans. However, ...
Rice is cultivated throughout Africa in a vast array of environments. Crop growth modelling at AfricaRice seeks to develop an understanding of genotype, management and environment interactions to inform research and development. This paper reviews progress made over thirty years of modelling, as well as the knowledge gaps remaining. Major advances ...
Building reliable species distribution models (SDMs) from presence‐only information requires a good understanding of the spatial variation in the sampling effort. However, in most cases, the sampling effort is unknown, leading to biases in SDMs. This study proposes a method to jointly estimate the parameters of sampling effort and species densities...
