Kumar, Manish
Cancer is a fatal genetic disease with different aspects of complexity, including cancer immune evasion, treatment resistance and recurrence, requiring optimized treatment for proper cure. Molecular studies have revealed that tumors are extremely heterogeneous in nature, leading to the complexity of cancer progression that is ultimately linked to i...
Elhussein, Ahmed Baymuradov, Ulugbek Elhadad, Noémie Natarajan, Karthik Gürsoy, Gamze
Precision medicine has the potential to provide more accurate diagnosis, appropriate treatment and timely prevention strategies by considering patients biological makeup. However, this cannot be realized without integrating clinical and omics data in a data-sharing framework that achieves large sample sizes. Systems that integrate clinical and gene...
Cho, Nicholas S Sanvito, Francesco Le, Viên Lam Oshima, Sonoko Teraishi, Ashley Yao, Jingwen Telesca, Donatello Raymond, Catalina Pope, Whitney B Nghiemphu, Phioanh L
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PurposeThis study compared the classification performance of normalized apparent diffusion coefficient (nADC) with percentage T2-FLAIR mismatch-volume (%T2FM-volume) for differentiating between IDH-mutant astrocytoma (IDHm-A) and other glioma molecular subtypes.MethodsA total of 105 non-enhancing gliomas were studied. T2-FLAIR digital subtraction m...
Liley, James Bunclark, Katherine Newnham, Michael Cannon, John Sheares, Karen Taboada, Dolores Ng, Choo Screaton, Nicholas Jenkins, David Pepke-Zaba, Joanna
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BACKGROUND: Risk prediction tools are routinely utilised in cardiothoracic surgery but have not been developed for pulmonary endarterectomy (PEA). There is no data on whether patients undergoing PEA may benefit from a tailored risk modelling approach. We develop and validate a clinically-usable tool to predict PEA 90-day mortality (90 DM) with the ...
Kim-McManus, Olivia Gleeson, Joseph Mignon, Laurence Smith Fine, Amena Yan, Winston Nolen, Nicole Demarest, Scott Berry-Kravis, Elizabeth Finkel, Richard Leonard, Stefanie
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Individualized genetic therapies-medicines that precisely target a genetic variant that may only be found in a small number of individuals, as few as only one-offer promise for addressing unmet needs in genetic disease, but present unique challenges for trial design. By nature these new individualized medicines require testing in individualized N-o...
Zhang, Ze Sehgal, Kartik Shirai, Keisuke Butler, Rondi A Wiencke, John K Koestler, Devin C Ramush, Geat Lee, Min Kyung Molinaro, Annette M Stolrow, Hannah G
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Tissue biomarkers for immune checkpoint inhibitor (ICI) response are limited by tumor sample heterogeneity and availability. This study identifies clinically actionable pretreatment blood biomarkers that are associated with ICI treatment response and survival in recurrent/metastatic head and neck squamous cell carcinoma. A prospective multi-center ...
Kumar, Manish
Cancer is a complex disease having a number of composite problems to be considered including cancer immune evasion, therapy resistance, and recurrence for a cure. Fundamentally, it remains a genetic disease as diverse aspects of the complexity of tumor growth and cancer development relate to its genetic machinery and require addressing the problems...
Strauss, Alexandra Swann, Peter Kigar, Stacey L Christou, Rafailia Savinykh Yarkoni, Natalia Turner, Lorinda Murley, Alexander G Chouliaras, Leonidas Shapiro, Noah Ashton, Nicholas J
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The innate immune system plays an integral role in the progression of many neurodegenerative diseases. In addition to central innate immune cells (e.g., microglia), peripheral innate immune cells (e.g., blood monocytes, natural killer cells, and dendritic cells) may also differ in these conditions. However, the characterization of peripheral innate...
Kumar, Manish
Cancer is a deadly genetic disease with diverse aspects of complexity, including cancer immune evasion, treatment resistance, and recurrence requiring optimized treatment to be cured. Molecular studies have revealed that tumors are profoundly heterogeneous in nature, leading to the complexity of cancer progression that is ultimately linked to its g...
Justice, Amy C McMahon, Benjamin Madduri, Ravi Crivelli, Silvia Damrauer, Scott Cho, Kelly Ramoni, Rachel Muralidhar, Sumitra
ObjectivesIn 2016, the Department of Veterans Affairs (VA) and the Department of Energy (DOE) established an Interagency Agreement (IAA), the Million Veteran Program-Computational Health Analytics for Medical Precision to Improve Outcomes Now (MVP-CHAMPION) research collaboration.Materials and methodsOversight fell under the VA Office of Research D...