Leducq, Valentin Jary, Aude Bridier-Nahmias, Antoine Daniel, Lena Zafilaza, Karen Damond, Florence Goldstein, Valérie Duval, Audrey Blanquart, François Calvez, Vincent
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Published in
Scientific Reports
France went through three deadly epidemic waves due to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), causing major public health and socioeconomic issues. We proposed to study the course of the pandemic along 2020 from the outlook of two major Parisian hospitals earliest involved in the fight against COVID-19. Genome sequencing ...
Amses, Kevin R Simmons, D Rabern Longcore, Joyce E Mondo, Stephen J Seto, Kensuke Jerônimo, Gustavo H Bonds, Anne E Quandt, C Alisha Davis, William J Chang, Ying
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Most of the described species in kingdom Fungi are contained in two phyla, the Ascomycota and the Basidiomycota (subkingdom Dikarya). As a result, our understanding of the biology of the kingdom is heavily influenced by traits observed in Dikarya, such as aerial spore dispersal and life cycles dominated by mitosis of haploid nuclei. We now apprecia...
Sundaresan, Abhirami Krishnamoorthy Vincent, Keerthana Mohan, Ganesh Babu Malli Ramakrishnan, Jayapradha
Published in
Journal of global antimicrobial resistance
Klebsiella pneumoniae genomic surveillance in India was performed to understand the spread of antimicrobial resistant genes across the country over 10 years and to delineate environment and clinical K. pneumoniae through comparative genomics approach. The genomic data of 153 strains were retrieved from PATRIC. To compare the presence of AMR genes, ...
Ernakovich, Jessica G Barbato, Robyn A Rich, Virginia I Schädel, Christina Hewitt, Rebecca E Doherty, Stacey J Whalen, Emily D Abbott, Benjamin W Barta, Jiri Biasi, Christina
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The physical and chemical changes that accompany permafrost thaw directly influence the microbial communities that mediate the decomposition of formerly frozen organic matter, leading to uncertainty in permafrost-climate feedbacks. Although changes to microbial metabolism and community structure are documented following thaw, the generality of post...
Alotaibi, Bandar H Amor, Nabil Merella, Paolo Mohammed, Osama B Alagaili, Abdulaziz N
Published in
Veterinary research communications
Throughout history, wildlife has been regarded as a major source of infectious diseases. Rodentia, the most speciose order of mammals, whose members are recognised hosts of more than 60 zoonotic diseases, represent a potential threat to human health. Recently, epidemiological data from Saudi Arabia indicated an actual growth in the number of emergi...
Mosena, Ana Cristina Sbaraini Wolf, Jonas Michel Paim, Willian Pinto Baumbach, Letícia Ferreira da Silva, Mariana Soares Silveira, Simone Olegário, Juliana do Canto Budaszewski, Renata da Fontoura Weber, Matheus Nunes Canal, Cláudio Wageck
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Published in
Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
In this study, phylogenetic and evolutionary analyses of cattle pestiviruses (BVDV-1, 2 and HoBiPeV) originating in Brazil were used to investigate the temporal diversification of subgenotypes in the country. Inferred dated phylogeny and time of the most recent common ancestor (tMRCA) demonstrated that some BVDV subgenotypes (1a, 1b, 1d, 1e, and 2b...
Pinheiro, Melquizedec Luiz Silva Nagamachi, Cleusa Yoshiko Ribas, Talita Fernanda Augusto Diniz, Cristovam Guerreiro O Brien, Patricia Caroline Mary Ferguson-Smith, Malcolm Andrew Yang, Fengtang Pieczarka, Julio Cesar
Charadriiformes represent one of the largest orders of birds; members of this order are diverse in morphology, behavior and reproduction, making them an excellent model for studying evolution. It is accepted that the avian putative ancestral karyotype, with 2n = 80, remains conserved for about 100 million years. So far, only a few species of Charad...
Montejo-Kovacevich, Gabriela Meier, Joana I Bacquet, Caroline N Warren, Ian A Chan, Yingguang Frank Kucka, Marek Salazar, Camilo Rueda-M, Nicol Montgomery, Stephen H McMillan, W Owen
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Repeated evolution can provide insight into the mechanisms that facilitate adaptation to novel or changing environments. Here we study adaptation to altitude in two tropical butterflies, Heliconius erato and H. melpomene, which have repeatedly and independently adapted to montane habitats on either side of the Andes. We sequenced 518 whole genomes ...
Morales-Poole, José R; de Vega, Clara; Tsuji, Kaoru; Jacquemyn, Hans; 32939; Junker, Robert R; Herrera, Carlos M; Michiels, Chris; 11241; Lievens, Bart; 19097; Álvarez-Pérez, Sergio;
The floral nectar of angiosperms harbors a variety of microorganisms that depend predominantly on animal visitors for their dispersal. Although some members of the genus Acinetobacter and all currently known species of Rosenbergiella are thought to be adapted to thrive in nectar, there is limited information about the response of these bacteria to ...
Kundu, Shantanu Alam, Imran Maheswaran, Gopinathan Tyagi, Kaomud Kumar, Vikas
Published in
Biochemical genetics
The complete mitogenome sequence of the Great Frigatebird, Fregata minor was sequenced for the first time in this study. The mitogenome (16,899 bp) comprises of 13 protein-coding genes (PCGs), two ribosomal RNA (rRNA) genes, and 22 transfer RNA (tRNA) genes, and a control region (CR). The mitogenome was AT-rich (55.60%) with 11 overlapping and 18 i...
