Li, Zixin Jiao, Yang Ling, Jian Zhao, Jianlong Yang, Yuhong Mao, Zhenchuan Zhou, Kaixiang Wang, Wenzhao Xie, Bingyan Li, Yan
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peer reviewed / N-methyltransferase (NMT)-catalyzed methylation at the termini of nonribosomal peptides (NRPs) has rarely been reported. Here, we discover a fungal NMT LcsG for the iterative terminal N-methylation of a family of NRPs, leucinostatins. Gene deletion results suggest that LcsG is essential for leucinostatins methylation. Results from i...
Peng, Bin Ran, Jianguo Li, Yiyang Tang, Meiling Xiao, Huilin Shi, Shengpeng Ning, Youzheng Dark, Adeeba Li, Jin Guan, Xueqiang
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Publication status: Published / Bouquet is a fascinating wine characteristic that serves as an indicator of wine quality, developing during the aging process. The multifunctional monoterpenol oxidase VvCYP76F14 in wine grapes sequentially catalyzes three reactions to produce (E)-8-carboxylinalool, a crucial precursor for wine bouquet. Previous stud...
Subach, Oksana M Tashkeev, Aleksandr Vlaskina, Anna V Petrenko, Dmitry E Gaivoronskii, Filipp A Nikolaeva, Alena Y Ivashkina, Olga I Anokhin, Konstantin V Popov, Vladimir O Boyko, Konstantin M
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peer reviewed / Genetically encoded monomeric blue-to-red fluorescent timers (mFTs) change their fluorescent color over time. mCherry-derived mFTs were used for the tracking of the protein age, visualization of the protein trafficking, and labeling of engram cells. However, the brightness of the blue and red forms of mFTs are 2-3- and 5-7-fold dimm...
Smith, Ben M Rowling, Pamela JE Dobson, Christopher M Itzhaki, Laura S
The Wnt signalling pathway plays an important role in cell proliferation, differentiation, and fate decisions in embryonic development and the maintenance of adult tissues. The twelve armadillo (ARM) repeat-containing protein β-catenin acts as the signal transducer in this pathway. Here, we investigated the interaction between β-catenin and the int...
Selmi, Tommaso Hussain, Shobbir Dietmann, Sabine Heiß, Matthias Borland, Kayla Flad, Sophia Carter, Jean-Michel Dennison, Rebecca Huang, Ya-Lin Kellner, Stefanie
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The highly abundant N6-methyladenosine (m6A) RNA modification affects most aspects of mRNA function, yet the precise function of the rarer 5-methylcytidine (m5C) remains largely unknown. Here, we map m5C in the human transcriptome using methylation-dependent individual-nucleotide resolution cross-linking and immunoprecipitation (miCLIP) combined wi...
Smith, Ewan M Benbahouche, Nour El Houda Morris, Katherine Wilczynska, Ania Gillen, Sarah Schmidt, Tobias Meijer, Hedda A Jukes-Jones, Rebekah Cain, Kelvin Jones, Carolyn
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The mammalian target of rapamycin (mTOR) is a critical regulator of cell growth, integrating multiple signalling cues and pathways. Key among the downstream activities of mTOR is the control of the protein synthesis machinery. This is achieved, in part, via the co-ordinated regulation of mRNAs that contain a terminal oligopyrimidine tract (TOP) at ...
Kivrak, Ezgi Pauzaite, Tekle Copeland, Nikki A Hardy, John G Kara, Pinar Firlak, Melike Yardimci, Atike I Yilmaz, Selahattin Palaz, Fahreddin Ozsoz, Mehmet
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The CRISPR-Cas9 system has facilitated the genetic modification of various model organisms and cell lines. The outcomes of any CRISPR-Cas9 assay should be investigated to ensure/improve the precision of genome engineering. In this study, carbon nanotube-modified disposable pencil graphite electrodes (CNT/PGEs) were used to develop a label-free elec...
Belcher, Thomas MacArthur, Iain King, Jerry D Langridge, Gemma C Mayho, Matthew Parkhill, Julian Preston, Andrew
The identification of genes essential for a bacterium's growth reveals much about its basic physiology under different conditions. Bordetella pertussis, the causative agent of whooping cough, adopts both virulent and avirulent states through the activity of the two-component system, Bvg. The genes essential for B. pertussis growth in vitro were def...
Bhattacharya, Kaushik Weidenauer, Lorenz Luengo, Tania Morán Pieters, Ellis C Echeverría, Pablo C Bernasconi, Lilia Wider, Diana Sadian, Yashar Koopman, Margreet B Villemin, Matthieu
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Hop/Stip1/Sti1 is thought to be essential as a co-chaperone to facilitate substrate transfer between the Hsp70 and Hsp90 molecular chaperones. Despite this proposed key function for protein folding and maturation, it is not essential in a number of eukaryotes and bacteria lack an ortholog. We set out to identify and to characterize its eukaryote-sp...
Swain, Brendan M Guo, Dawei Singh, Himansha Rawlins, Philip B McAlister, Mark van Veen, Hendrik W
Multidrug transporters can confer drug resistance on cells by extruding structurally unrelated compounds from the cellular interior. In transport assays, Hoechst 33342 (referred to as Hoechst) is a commonly used substrate, the fluorescence of which changes in the transport process. With three basic nitrogen atoms that can be protonated, Hoechst can...