Chavan, Archana G Swan, Jeffrey A Heisler, Joel Sancar, Cigdem Ernst, Dustin C Fang, Mingxu Palacios, Joseph G Spangler, Rebecca K Bagshaw, Clive R Tripathi, Sarvind
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Circadian clocks control gene expression to provide an internal representation of local time. We report reconstitution of a complete cyanobacterial circadian clock in vitro, including the central oscillator, signal transduction pathways, downstream transcription factor, and promoter DNA. The entire system oscillates autonomously and remains phase c...
Chow, Gary K Chavan, Archana G Heisler, Joel C Chang, Yong-Gang LiWang, Andy Britt, R David
The cyanobacterial circadian clock in Synechococcus elongatus consists of three proteins, KaiA, KaiB, and KaiC. KaiA and KaiB rhythmically interact with KaiC to generate stable oscillations of KaiC phosphorylation with a period of 24 h. The observation of stable circadian oscillations when the three clock proteins are reconstituted and combined in ...
Taton, Arnaud Erikson, Christian Yang, Yiling Rubin, Benjamin E Rifkin, Scott A Golden, James W Golden, Susan S
The cyanobacterium Synechococcus elongatus is a model organism for the study of circadian rhythms. It is naturally competent for transformation-that is, it takes up DNA from the environment, but the underlying mechanisms are unclear. Here, we use a genome-wide screen to identify genes required for natural transformation in S. elongatus, including g...
Welkie, David G Rubin, Benjamin E Chang, Yong-Gang Diamond, Spencer Rifkin, Scott A LiWang, Andy Golden, Susan S
The recurrent pattern of light and darkness generated by Earth's axial rotation has profoundly influenced the evolution of organisms, selecting for both biological mechanisms that respond acutely to environmental changes and circadian clocks that program physiology in anticipation of daily variations. The necessity to integrate environmental respon...
Swan, Jeffrey A Golden, Susan S LiWang, Andy Partch, Carrie L
Circadian rhythms enable cells and organisms to coordinate their physiology with the cyclic environmental changes that come as a result of Earth's light/dark cycles. Cyanobacteria make use of a post-translational oscillator to maintain circadian rhythms, and this elegant system has become an important model for circadian timekeeping mechanisms. Com...
Orozco-Solis, Ricardo Montellier, Emilie Aguilar-Arnal, Lorena Sato, Shogo Vawter, Marquis P Bunney, Blynn G Bunney, William E Sassone-Corsi, Paolo
BackgroundConventional antidepressants usually require several weeks to achieve a full clinical response in patients with major depressive disorder, an illness associated with dysregulated circadian rhythms and a high incidence of suicidality. Two rapid-acting antidepressant strategies, low-dose ketamine (KT) and sleep deprivation (SD) therapies, d...
Tseng, Roger Goularte, Nicolette F Chavan, Archana Luu, Jansen Cohen, Susan E Chang, Yong-Gang Heisler, Joel Li, Sheng Michael, Alicia K Tripathi, Sarvind
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Circadian clocks are ubiquitous timing systems that induce rhythms of biological activities in synchrony with night and day. In cyanobacteria, timing is generated by a posttranslational clock consisting of KaiA, KaiB, and KaiC proteins and a set of output signaling proteins, SasA and CikA, which transduce this rhythm to control gene expression. Her...
Hirano, Arisa Fu, Ying-Hui Ptáček, Louis J
Endogenous biological rhythms with approximately 24-h periodicity are generated by the circadian clock, in which clock genes coordinate with one another and form a transcriptional-translational negative feedback loop. The precision of the circadian clock is further regulated by multiple post-translational modifications (PTMs), including phosphoryla...
Hughey, Jacob J Butte, Atul J
The daily timing of mammalian physiology is coordinated by circadian clocks throughout the body. Although measurements of clock gene expression indicate that these clocks in mice are normally in phase with each other, the situation in humans remains unclear. We used publicly available data from five studies, comprising over 1000 samples, to compare...
Beesley, Stephen Noguchi, Takako Welsh, David K
Circadian clocks impact vital cardiac parameters such as blood pressure and heart rate, and adverse cardiac events such as myocardial infarction and sudden cardiac death. In mammals, the central circadian pacemaker, located in the suprachiasmatic nucleus of the hypothalamus, synchronizes cellular circadian clocks in the heart and many other tissues...