Published in BMC Research Notes
ObjectiveIn this study we compare the amino acid and codon sequence of SARS-CoV-2, SARS-CoV and MERS-CoV using different statistics programs to understand their characteristics. Specifically, we are interested in how differences in the amino acid and codon sequence can lead to different incubation periods and outbreak periods. Our initial question ...
Published in The Science of the total environment
The COVID-19 pandemic has severely affected various aspects of life, at different levels and in different countries on almost every continent. In response, many countries have closed their borders and imposed lockdown policies, possibly bringing benefits to people's health with significantly less emission from air pollutants. Currently, most studie...
Published in Frontiers in Molecular Biosciences
Analysis of high-throughput omics data is one of the most important approaches for obtaining information regarding interactions between proteins/genes. Time-series omics data are a series of omics data points indexed in time order and normally contain more abundant information about the interactions between biological macromolecules than static omi...
Published in Sādhanā
Data is increasing rapidly day by day along with the transactional database. Dividing this data and storing it in a distributed manner is an effective way for storage and retrieval. Mining such distributed data with minimum dependence between sub-problems is a crucial task. Finding frequent itemsets and corresponding association rules is a big chal...
Published in Health informatics journal
Diagnostic tests are widely used in emergency departments to make detailed investigations on diagnosis and treat patients correctly. However, since these tests are expensive and time-consuming, ordering correct tests for patients is crucial for efficient use of hospital resources. Thus, understanding the relation between diagnosis and diagnostic te...
Published in BMC Medical Informatics and Decision Making
BackgroundAdverse drug events (ADEs) often occur as a result of drug-drug interactions (DDIs). The use of data mining for detecting effects of drug combinations on ADE has attracted growing attention and interest, however, most studies focused on analyzing pairwise DDIs. Recent efforts have been made to explore the directional relationships among h...
In this paper, we present a collaborative multi-agent based system for data mining. We have used two data mining model functions, clustering of variables in order to build homogeneous groups of attributes, association rules inside each of these groups and a multi-agent approach to integrate the both data mining techniques. For the association rules...
Published in E3S Web of Conferences
The sustainability of a company will not be separated from the role of consumers in conducting transactions. In fact, a consumer has different behaviour and character, therefore as a company owner must be able to analyze the patterns or habits of consumers in making transactions. This also happens in the retail center X, which has problems in the s...
Published in IEEE journal of biomedical and health informatics
Mining high-order drug-drug interaction (DDI) induced adverse drug effects from electronic health record databases is an emerging area, and very few studies have explored the relationships between high-order drug combinations. We investigate a novel pharmacovigilance problem for mining directional DDI effects on myopathy using the FDA Adverse Event...
Published in Journal of Big Data
In this paper, we present a Hadoop implementation of the Apriori algorithm. Using Hadoop’s distributed and parallel MapReduce environment, we present an architecture to mine positive as well as negative association rules in big data using frequent itemset mining and the Apriori algorithm. We also analyze and present the results of a few optimizatio...
