Hudson, Andrew M. Cooley, Lynn
Published in
Methods
Drosophila oogenesis is an excellent system for the study of developmental cell biology. Active areas of research include stem cell maintenance, gamete development, pattern formation, cytoskeletal regulation, intercellular communication, intercellular transport, cell polarity, cell migration, cell death, morphogenesis, cell cycle control, and many ...
Debard, Sylvain Bader, Gaétan De Craene, Johan-Owen Enkler, Ludovic Bär, Séverine Laporte, Daphné Hammann, Philippe Myslinski, Evelyne Senger, Bruno Friant, Sylvie
...
Published in
Methods (San Diego, Calif.)
By definition, cytosolic aminoacyl-tRNA synthetases (aaRSs) should be restricted to the cytosol of eukaryotic cells where they supply translating ribosomes with their aminoacyl-tRNA substrates. However, it has been shown that other translationally-active compartments like mitochondria and plastids can simultaneously contain the cytosolic aaRS and i...
Ou, Horng D Deerinck, Thomas J Bushong, Eric Ellisman, Mark H O'Shea, Clodagh C
Published in
Methods (San Diego, Calif.)
Structural studies of viral proteins most often use high-resolution techniques such as X-ray crystallography, nuclear magnetic resonance, single particle negative stain, or cryo-electron microscopy (EM) to reveal atomic interactions of soluble, homogeneous viral proteins or viral protein complexes. Once viral proteins or complexes are separated fro...
Reggiori, Fulvio Codogno, Patrice
Published in
Methods (San Diego, Calif.)
Reggiori, Fulvio Patrice Codogno
Published in
Methods
Luo, Yi North, Justin A Poirier, Michael G
Published in
Methods (San Diego, Calif.)
Site specific DNA binding complexes must bind their DNA target sites and then reside there for a sufficient amount of time for proper regulation of DNA processing including transcription, replication and DNA repair. In eukaryotes, the occupancy of DNA binding complexes at their target sites is regulated by chromatin structure and dynamics. Methodol...
Howat, William J. Wilson, Beverley A.
Published in
Methods
It is impossible to underplay the importance of fixation in histopathology. Whether the scientist is interested in the extraction of information on lipids, proteins, RNA or DNA, fixation is critical to this extraction. This review aims to give a brief overview of the current “state of play” in fixation and focus on the effect fixation, and particul...
Bassett, Andrew Liu, Ji-Long
Published in
Methods
Genome engineering has revolutionised genetic analysis in many organisms. Here we describe a simple and efficient technique to generate and detect novel mutations in desired target genes in Drosophila melanogaster. We target double strand breaks to specific sites within the genome by injecting mRNA encoding the Cas9 endonuclease and in vitro transc...
Holkers, Maarten Cathomen, Toni Gonçalves, Manuel A.F.V.
Published in
Methods
Transcription activator-like effector nucleases (TALENs) are designed to cut the genomic DNA at specific chromosomal positions. The resulting DNA double strand break activates cellular repair pathways that can be harnessed for targeted genome modifications. TALENs thus constitute a powerful tool to interrogate the function of DNA sequences within c...
Neyen, Claudine Bretscher, Andrew J. Binggeli, Olivier Lemaitre, Bruno
Published in
Methods
Innate immune mechanisms are well conserved throughout evolution, and many theoretical concepts, molecular pathways and gene networks are applicable to invertebrate model organisms as much as vertebrate ones. Drosophila immunity research benefits from an easily manipulated genome, a fantastic international resource of transgenic tools and over a qu...